SrasV1, Main, Exploration, bibRecord, 002933

Intraspecies diversity of SARS-like coronaviruses in Rhinolophus sinicus and its implications for the origin of SARS coronaviruses in humans

Identifieur interne : 002933 ( Main/Exploration ); précédent : 002932; suivant : 002934

Intraspecies diversity of SARS-like coronaviruses in Rhinolophus sinicus and its implications for the origin of SARS coronaviruses in humans

Auteurs : JUNFA YUAN [République populaire de Chine] ; Chung-Chau Hon [Hong Kong] ; YAN LI [République populaire de Chine] ; DINGMING WANG [République populaire de Chine] ; GELIN XU [République populaire de Chine] ; HUAJUN ZHANG [République populaire de Chine] ; PENG ZHOU [République populaire de Chine] ; Leo L. M. Poon [Hong Kong] ; Tommy Tsan-Yuk Lam [Hong Kong] ; Frederick Chi-Ching Leung [Hong Kong] ; ZHENGLI SHI [République populaire de Chine]

Source :

Journal of general virology [ 0022-1317 ] ; 2010.

RBID : Pascal:10-0290738

Descripteurs français

Pascal (Inist)
- Virus syndrome respiratoire aigu sévère, Homme, Comparaison intraspécifique, Origine.
Wicri :
- topic : Homme.

English descriptors

KwdEn :
- Human, Intraspecific comparison, Origin, Severe acute respiratory syndrome virus.

Abstract

The Chinese rufous horseshoe bat (Rhinolophus sinicus) has been suggested to carry the direct ancestor of severe acute respiratory syndrome (SARS) coronavirus (SCoV), and the diversity of SARS-like CoVs (SLCoV) within this Rhinolophus species is therefore worth investigating. Here, we demonstrate the remarkable diversity of SLCoVs in R. sinicus and identify a strain with the same pattern of phylogenetic incongruence (i.e. an indication of recombination) as reported previously in another SLCoV strain. Moreover, this strain possesses a distinctive 579 nt deletion in the nsp3 region that was also found in a human SCoV from the late-phase epidemic. Phylogenetic analysis of the Orf1 region suggested that the human SCoVs are phylogenetically closer to SLCoVs in R. sinicus than to SLCoVs in other Rhinolophus species. These findings reveal a closer evolutionary linkage between SCoV in humans and SLCoVs in R. sinicus, defining the scope of surveillance to search for the direct ancestor of human SCoVs.

Affiliations:

Links toward previous steps (curation, corpus...)

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to stream PascalFrancis, to step Curation: 000827
to stream PascalFrancis, to step Checkpoint: 000142
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to stream Main, to step Curation: 002933

Le document en format XML

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<front><div type="abstract" xml:lang="en">The Chinese rufous horseshoe bat (Rhinolophus sinicus) has been suggested to carry the direct ancestor of severe acute respiratory syndrome (SARS) coronavirus (SCoV), and the diversity of SARS-like CoVs (SLCoV) within this Rhinolophus species is therefore worth investigating. Here, we demonstrate the remarkable diversity of SLCoVs in R. sinicus and identify a strain with the same pattern of phylogenetic incongruence (i.e. an indication of recombination) as reported previously in another SLCoV strain. Moreover, this strain possesses a distinctive 579 nt deletion in the nsp3 region that was also found in a human SCoV from the late-phase epidemic. Phylogenetic analysis of the Orf1 region suggested that the human SCoVs are phylogenetically closer to SLCoVs in R. sinicus than to SLCoVs in other Rhinolophus species. These findings reveal a closer evolutionary linkage between SCoV in humans and SLCoVs in R. sinicus, defining the scope of surveillance to search for the direct ancestor of human SCoVs.</div>
</front>
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<affiliations><list><country><li>Hong Kong</li>
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<name sortKey="Dingming Wang" sort="Dingming Wang" uniqKey="Dingming Wang" last="Dingming Wang">DINGMING WANG</name>
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<name sortKey="Huajun Zhang" sort="Huajun Zhang" uniqKey="Huajun Zhang" last="Huajun Zhang">HUAJUN ZHANG</name>
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<name sortKey="Yan Li" sort="Yan Li" uniqKey="Yan Li" last="Yan Li">YAN LI</name>
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<name sortKey="Lam, Tommy Tsan Yuk" sort="Lam, Tommy Tsan Yuk" uniqKey="Lam T" first="Tommy Tsan-Yuk" last="Lam">Tommy Tsan-Yuk Lam</name>
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Intraspecies diversity of SARS-like coronaviruses in Rhinolophus sinicus and its implications for the origin of SARS coronaviruses in humans

Intraspecies diversity of SARS-like coronaviruses in Rhinolophus sinicus and its implications for the origin of SARS coronaviruses in humans

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri